Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892290.1_cds_XP_016447176.1_41961
CDS Infomation

[gene=LOC107772193] [db_xref=GeneID:107772193] [protein=dnaJ protein ERDJ3A-like] [protein_id=XP_016447176.1] [location=complement(join(6067..6354,6471..6824,6954..7295,7372..7892,8262..8335,9788..9843,11265..11354))] [gbkey=CDS]
Sequence

ATGAAAACCCGAGGAATTTCAATAGCCATTGTTCTATGCGCATCACTTTTTGTTCTCAAC
ATTGAATCCAAAACGCTTGATCCTTACAAGGTGCTCGGAGTTGATAAAAATGCAAGTCAG
CGTGAGATCCAGAAAGCTTTTCACAAGCTCTCACTCCAATACCATCCAGACAAGAACAAA
AATAAGGGTGCACAAGAGAAATTTGCAGAGATTAATAACGCTTATGACATTCTGTCTGAT
GAGGAGAAGAGGAAGAACTATGACCTATATGGAGATGAGAAAGGAGCTCCTGGATTTGAC
GCTGGCGGTGCTGGAGATCATGGTGGATATACATACTTCACAAGTGGTGGACCAGGACAA
AGTGGGTTTAACTTCCGTCCAGGTGGTATGGGTGGACAAGGAGGTGCAAGGTCATACTCT
TTTTCCTTTGGTGGTCCTGGCAGCCAAAGCTCTTTCGGATTTGGTTTAGATGATATATTT
TCCAACATGTTTGGGGGTGATATCGGAAGTGGGAGTCAATTTGGGGGTTTTGGTGGCTTT
GGTGGTTCGGGCAGGTCTCAGTCTAGAACCAGGAACTCTGCTAAGAGCATTCCCTCCATA
AATTCACAGATGTATAAGAAAGAAATATCTGATAAGGGAATGACTTGGCTGTTACTATCT
CATACATCTACGTCAAGAGGTATCCAATATTATGAATCTGTCATTGGAGAAGTCGCAAGC
TCACTGGAAGGGGCGATGAAGGTGGGAAGTATAAACTGTGAAACTGATGCATCCTTTTGC
AAGGGCCTTGGCATGTATCCCCGCAATGCACCAAGATTGTTTGTGTATTCATTAAAATCA
AGTGGAAGTGGTGCTTTGGTGGAGTACAGTGATGATTTAGATGTGAAGAGGATGAAAAGT
TTTTGCCAAGAACATCTTCCTAGATTCTCGAAGCGAGTAGACTTGGACCACTTTGATTTT
GTTTCTCAGAGTATAGGAGGATTACCTAAAGTGATGCTTCTCTCTACAAAGAAGGACACT
CCGGTTATTTGGCGTGCTCTTAGTGGCTTGTATCGTGATCGTTTTGTCTTCTATGATGCA
CAGGTTCGTGATGGTTCTGATCCTGCTGTCCAAAAGCTGGGAGTTAATGCTCTTCCTGCC
ATTGTTGGCTGGCTATCCAATGGGGAAAAGCATATAATAAAAACAGGAATTTCTGTAAAA
GATCTAAAGTCTGCTATTCAAGATCTAAGTGGTTTACTTGATACTTGTGAAAAGAAAAAC
AAGAAGGCAGCTTCAGCACAGAGTAAAAGAGAGCCGAGTGAACCAGAGGCTAAACAAGTA
CCACTACTTACAGGCTCTAATTTCAATGATATTTGCGGGGAGAAAACTCCTCTGTGTGTG
ATTGGGGTCTTCAGGTCATCTAAAGCAAAGGATAAGCTAGAAAAAGTTCTATTATCGGTT
TCTCAAAAATCATTATTAAGGCGACAGAATGTAGCCTCAGGCTCAAGGGATTCAGTTACC
TATGCTCTTCTGGATGGGGCAAAGCAGCAGTCTTTCTTGAGTGCGTTTGATAGATCAGGA
TATAAATCATCAGACAAGCTCTTGCTCGCCTACAAGCCGCGGAAGGGTAAGTTTGCAGTT
TTTGAGGGGGAAGTTACTACTGAAGAAGCAGAGAGTTTCATTAGCTCCGTTCTCAGTGGG
GATGTACAATTTTCCAACACGAGACAGAAACCTATAGCAAAGTAG

Peptide Sequence

PEP ID

XP_016447176.1
PEP Infomation

PREDICTED: dnaJ protein ERDJ3A-like [Nicotiana tabacum]
Sequence

MKTRGISIAIVLCASLFVLNIESKTLDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNK
NKGAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGAPGFDAGGAGDHGGYTYFTSGGPGQ
SGFNFRPGGMGGQGGARSYSFSFGGPGSQSSFGFGLDDIFSNMFGGDIGSGSQFGGFGGF
GGSGRSQSRTRNSAKSIPSINSQMYKKEISDKGMTWLLLSHTSTSRGIQYYESVIGEVAS
SLEGAMKVGSINCETDASFCKGLGMYPRNAPRLFVYSLKSSGSGALVEYSDDLDVKRMKS
FCQEHLPRFSKRVDLDHFDFVSQSIGGLPKVMLLSTKKDTPVIWRALSGLYRDRFVFYDA
QVRDGSDPAVQKLGVNALPAIVGWLSNGEKHIIKTGISVKDLKSAIQDLSGLLDTCEKKN
KKAASAQSKREPSEPEAKQVPLLTGSNFNDICGEKTPLCVIGVFRSSKAKDKLEKVLLSV
SQKSLLRRQNVASGSRDSVTYALLDGAKQQSFLSAFDRSGYKSSDKLLLAYKPRKGKFAV
FEGEVTTEEAESFISSVLSGDVQFSNTRQKPIAK

Transcript Sequence

Gene sequence data has not been registered.